First Images From Complete Map of Mouse Brain

Despite plenty of advances in neuroscience, often what we know about the brain comes with gaps, and anything close to a full piece of knowledge always ends up lacking something — whether it’s for the human brain or a mouse’s.

Researchers from the Cold Spring Harbor Laboratory are starting to remedy that — the mouse version, at least — by developing a full, 3-D, virtual map of a vertebrate brain. Now they’ve let the public in on the first chapter of the research: 500 terabytes of mouse brain.

The 3-D image is actually several cross-sections of different brains, each made up from slices of mice brains from a similar demographic (age, gender, etc.) and overlaid to let a viewer zoom in on a specific point and follow individual neuropathways. Each slice is made up of 500 images, but each image contains close to a billion pixels, meaning the project is going for the kind of resolution the complexity of a vertebrate’s complete brain requires. It’s part of the Mouse Brain Architecture Project, and what’s especially surprising is that this kind of resolution is actually a nice middle-ground; MRIs don’t provide as much detail, but with electron microscopy you can’t do much better than the complexity of a fruit fly’s brain. And even at this level, there’s a lot of data to handle: this couldn’t have been done a decade ago with data storage prices.

Next stop? More mouse brain pictures, probably. The human brain is an even bigger, more complicated beast, and successfully putting that together means a lot of bytes.

Cold Spring Harbor Laboratory